Protein or peptide name:ScRYMV
Chromosome:Rice yellow mottle virus satellite, complete genome
Protein or peptide start site:3
Protein or peptide end site:218
ncRNA start site:3
ncRNA end site:218
Genome Browser:NA
Protein or peptide sequence:MKETAAAKFERQHMDSPDLGTLVPRGSMGYLWIRIRARYPGRPGRLGAVHRASLWSEPGLQGAWRRNRSVGTTRTISHRAPAASSCAGGGDFVSSLTDTDEPRGTWRHPGISPGSTWAARSRAQGVAVERAWPPRGLEAKPVCWDHSDHQSSCSGSFQLRRGRRFCFEPYRHAKRNLEAPRNFTRVDLGGEPCTGRRCGASLASKGPGGETGLLGPLGPSVIVLRQL
Protein or peptide length:227aa
ncRNA type:circRNA
ncRNA name:scRYMV
Entrez ID:932238
Experimental species:rice yellow mottle virus (sobemovirus)
Experimental techniques:MS/Western blotting/Immunoprecipitation
Experimental sample (cell line and/or tissue):E. coli
Description:The highly structured (64% GC) covalently closed circular (CCC) RNA (220 nt) of the virusoid associated with rice yellow mottle virus codes for a 16-kDa highly basic protein using novel modalities for coding, translation, and gene expression.
Subcellular location:NA
Function:This CCC RNA is the smallest among all known viroids and virusoids and the only one that codes proteins.
Title of paper:Novel coding, translation, and gene expression of a replicating covalently closed circular RNA of 220 nt
PMID:25253891
Year of publication:2014